Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00217 | Not Available | - | 267851 - 268876 | 39537.5 |
| excinuclease abc subunit a | HMPREF1534_00218 | Not Available | - | 268894 - 271680 | 104309.0 |
| hypothetical protein | HMPREF1534_00219 | Not Available | + | 272140 - 273639 | 58109.6 |
| hypothetical protein | HMPREF1534_00220 | Not Available | + | 274282 - 275166 | 33613.5 |
| hypothetical protein | HMPREF1534_00221 | Not Available | + | 275163 - 275948 | 30083.2 |
| hypothetical protein | HMPREF1534_00222 | Not Available | + | 275968 - 277353 | 51309.5 |
| hypothetical protein | HMPREF1534_00223 | Not Available | - | 277562 - 278134 | 20933.2 |
| hypothetical protein | HMPREF1534_00224 | Not Available | - | 278131 - 278679 | 20348.7 |
| hypothetical protein | HMPREF1534_00225 | Not Available | - | 278683 - 282723 | 155278.0 |
| phosphoribosylformylglycinamidine synthase | HMPREF1534_00226 | Not Available | - | 282803 - 286504 | 137014.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


