Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00197 | Not Available | - | 237951 - 239144 | 43110.5 |
| riboflavin biosynthesis protein ribba | HMPREF1534_00198 | Not Available | - | 239269 - 240483 | 44805.1 |
| hypothetical protein | HMPREF1534_00199 | Not Available | - | 240486 - 242387 | 72984.0 |
| hypothetical protein | HMPREF1534_00200 | Not Available | - | 242471 - 242857 | 15158.9 |
| Trna-met | Not Available | Not Available | + | 243064 - 243140 | Not Available |
| hypothetical protein | HMPREF1534_00202 | Not Available | + | 243148 - 243516 | 14453.2 |
| hypothetical protein | HMPREF1534_00203 | Not Available | + | 244376 - 245131 | 28262.2 |
| hypothetical protein | HMPREF1534_00204 | Not Available | - | 245304 - 247652 | 85569.9 |
| hypothetical protein | HMPREF1534_00205 | Not Available | - | 247649 - 250390 | 104274.0 |
| hypothetical protein | HMPREF1534_00206 | Not Available | - | 250516 - 252009 | 55929.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


