Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00187 | Not Available | - | 225932 - 227251 | 49792.9 |
| efflux transporter, rnd family, mfp subunit | HMPREF1534_00188 | Not Available | - | 227254 - 228351 | 40153.4 |
| hypothetical protein | HMPREF1534_00189 | Not Available | - | 228414 - 229658 | 46119.1 |
| hypothetical protein | HMPREF1534_00190 | Not Available | - | 229660 - 230913 | 45885.1 |
| hypothetical protein | HMPREF1534_00191 | Not Available | - | 230926 - 231645 | 26807.5 |
| hypothetical protein | HMPREF1534_00192 | Not Available | + | 231797 - 232774 | 34543.7 |
| hypothetical protein | HMPREF1534_00193 | Not Available | + | 232774 - 233163 | 15353.4 |
| 50s ribosomal protein l19 | HMPREF1534_00194 | Not Available | - | 234012 - 234365 | 13073.1 |
| hypothetical protein | HMPREF1534_00195 | Not Available | + | 234617 - 237586 | 110557.0 |
| hypothetical protein | HMPREF1534_00196 | Not Available | + | 237704 - 237871 | 5656.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


