Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00167 | Not Available | + | 204068 - 205777 | 66316.9 |
| hypothetical protein | HMPREF1534_00168 | Not Available | + | 205939 - 206859 | 35135.8 |
| Trna-leu | Not Available | Not Available | + | 207004 - 207085 | Not Available |
| hypothetical protein | HMPREF1534_00170 | Not Available | - | 207171 - 208202 | 39307.3 |
| hypothetical protein | HMPREF1534_00171 | Not Available | - | 208210 - 209055 | 31890.0 |
| hypothetical protein | HMPREF1534_00172 | Not Available | - | 209059 - 211761 | 103080.0 |
| glycine-trna ligase | HMPREF1534_00173 | Not Available | + | 211913 - 213454 | 59454.0 |
| hypothetical protein | HMPREF1534_00174 | Not Available | + | 213465 - 214076 | 22346.4 |
| aspartate-semialdehyde dehydrogenase | HMPREF1534_00175 | Not Available | - | 214521 - 215531 | 37344.9 |
| hypothetical protein | HMPREF1534_00176 | Not Available | + | 215693 - 217843 | 80149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


