Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00136 | Not Available | - | 161540 - 162526 | 35958.2 |
| hypothetical protein | HMPREF1534_00137 | Not Available | - | 162536 - 164002 | 53337.7 |
| hypothetical protein | HMPREF1534_00138 | Not Available | - | 164282 - 165154 | 33469.4 |
| malate dehydrogenase | HMPREF1534_00139 | Not Available | + | 165309 - 166250 | 32849.9 |
| hypothetical protein | HMPREF1534_00140 | Not Available | - | 166609 - 168309 | 61791.6 |
| hypothetical protein | HMPREF1534_00141 | Not Available | - | 168338 - 168853 | 19915.1 |
| hypothetical protein | HMPREF1534_00142 | Not Available | - | 168850 - 170151 | 52492.4 |
| hypothetical protein | HMPREF1534_00143 | Not Available | - | 170148 - 170543 | 15316.7 |
| nad-specific glutamate dehydrogenase | HMPREF1534_00144 | Not Available | - | 170707 - 172044 | 48517.5 |
| hypothetical protein | HMPREF1534_00145 | Not Available | - | 172105 - 172221 | 4454.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


