Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01176 | Not Available | Positive | 1357647 - 1358711 | 41387.8 |
| hypothetical protein | HMPREF1534_01177 | Not Available | Negative | 1358807 - 1359280 | 17496.0 |
| hypothetical protein | HMPREF1534_01178 | Not Available | Negative | 1359366 - 1360130 | 28308.2 |
| hypothetical protein | HMPREF1534_01179 | Not Available | Negative | 1360481 - 1361755 | 49378.5 |
| hypothetical protein | HMPREF1534_01180 | Not Available | Negative | 1361752 - 1362183 | 16606.9 |
| hypothetical protein | HMPREF1534_01181 | Not Available | Negative | 1362233 - 1362469 | 8824.4 |
| hypothetical protein | HMPREF1534_01182 | Not Available | Negative | 1362503 - 1362805 | 11868.4 |
| hypothetical protein | HMPREF1534_01183 | Not Available | Positive | 1363202 - 1363486 | 11016.1 |
| hypothetical protein | HMPREF1534_01184 | Not Available | Positive | 1363526 - 1364017 | 18605.7 |
| hypothetical protein | HMPREF1534_01185 | Not Available | Positive | 1364045 - 1364605 | 20617.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


