Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna adenine n-6-methyltransferase | HMPREF1534_01146 | Not Available | Positive | 1329641 - 1329820 | 7103.19 |
| rrna adenine n-6-methyltransferase | HMPREF1534_01147 | Not Available | Positive | 1329820 - 1330272 | 17348.4 |
| hypothetical protein | HMPREF1534_01148 | Not Available | Negative | 1330480 - 1331337 | 32965.2 |
| hypothetical protein | HMPREF1534_01149 | Not Available | Negative | 1331515 - 1332378 | 34109.8 |
| hypothetical protein | HMPREF1534_01150 | Not Available | Positive | 1332607 - 1333353 | 28414.8 |
| hypothetical protein | HMPREF1534_01151 | Not Available | Negative | 1333421 - 1334260 | 31643.0 |
| hypothetical protein | HMPREF1534_01152 | Not Available | Positive | 1334322 - 1335569 | 47703.1 |
| hypothetical protein | HMPREF1534_01153 | Not Available | Negative | 1335693 - 1336961 | 47600.2 |
| hypothetical protein | HMPREF1534_01154 | Not Available | Negative | 1336989 - 1337672 | 25602.6 |
| hypothetical protein | HMPREF1534_01155 | Not Available | Negative | 1337768 - 1338268 | 18795.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


