Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01116 | Not Available | Negative | 1278199 - 1278543 | 13491.3 |
| hypothetical protein | HMPREF1534_01117 | Not Available | Negative | 1278725 - 1286662 | 291799.0 |
| hypothetical protein | HMPREF1534_01118 | Not Available | Negative | 1286659 - 1287297 | 23992.7 |
| hypothetical protein | HMPREF1534_01119 | Not Available | Negative | 1287310 - 1287813 | 18209.0 |
| hypothetical protein | HMPREF1534_01120 | Not Available | Negative | 1287888 - 1289330 | 53114.5 |
| hypothetical protein | HMPREF1534_01121 | Not Available | Negative | 1289372 - 1290163 | 29473.1 |
| hypothetical protein | HMPREF1534_01122 | Not Available | Positive | 1290284 - 1290718 | 16883.1 |
| hypothetical protein | HMPREF1534_01123 | Not Available | Positive | 1290679 - 1291197 | 19545.5 |
| hypothetical protein | HMPREF1534_01124 | Not Available | Positive | 1291187 - 1293283 | 80074.0 |
| hypothetical protein | HMPREF1534_01125 | Not Available | Positive | 1293308 - 1293661 | 13750.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


