Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01096 | Not Available | Positive | 1265243 - 1265404 | 6213.16 |
| hypothetical protein | HMPREF1534_01097 | Not Available | Positive | 1265417 - 1265620 | 7808.37 |
| hypothetical protein | HMPREF1534_01098 | Not Available | Positive | 1265631 - 1265867 | 9099.98 |
| hypothetical protein | HMPREF1534_01099 | Not Available | Positive | 1265904 - 1266329 | 16037.5 |
| hypothetical protein | HMPREF1534_01100 | Not Available | Positive | 1266295 - 1266663 | 13605.5 |
| hypothetical protein | HMPREF1534_01101 | Not Available | Positive | 1266671 - 1269367 | 101967.0 |
| hypothetical protein | HMPREF1534_01102 | Not Available | Negative | 1269462 - 1269992 | 20477.8 |
| hypothetical protein | HMPREF1534_01103 | Not Available | Negative | 1270008 - 1270520 | 18986.9 |
| hypothetical protein | HMPREF1534_01104 | Not Available | Negative | 1270539 - 1270988 | 17465.7 |
| hypothetical protein | HMPREF1534_01105 | Not Available | Negative | 1270991 - 1271539 | 20787.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


