Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01086 | Not Available | Positive | 1261179 - 1261649 | 18188.7 |
| hypothetical protein | HMPREF1534_01087 | Not Available | Positive | 1261646 - 1261963 | 12526.8 |
| hypothetical protein | HMPREF1534_01088 | Not Available | Positive | 1261967 - 1262272 | 12321.8 |
| hypothetical protein | HMPREF1534_01089 | Not Available | Positive | 1262269 - 1262559 | 11051.0 |
| hypothetical protein | HMPREF1534_01090 | Not Available | Positive | 1262751 - 1263236 | 18803.1 |
| hypothetical protein | HMPREF1534_01091 | Not Available | Positive | 1263264 - 1263467 | 7700.79 |
| hypothetical protein | HMPREF1534_01092 | Not Available | Positive | 1263475 - 1263765 | 11417.3 |
| hypothetical protein | HMPREF1534_01093 | Not Available | Positive | 1263783 - 1264037 | 10227.4 |
| hypothetical protein | HMPREF1534_01094 | Not Available | Positive | 1264055 - 1264573 | 19780.5 |
| hypothetical protein | HMPREF1534_01095 | Not Available | Positive | 1264548 - 1265240 | 26477.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


