Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01076 | Not Available | Positive | 1255470 - 1255745 | 10413.9 |
| hypothetical protein | HMPREF1534_01077 | Not Available | Positive | 1255745 - 1256359 | 22831.8 |
| hypothetical protein | HMPREF1534_01078 | Not Available | Positive | 1256349 - 1256762 | 16068.5 |
| hypothetical protein | HMPREF1534_01079 | Not Available | Positive | 1256774 - 1257574 | 31144.3 |
| hypothetical protein | HMPREF1534_01080 | Not Available | Positive | 1257543 - 1258208 | 25841.8 |
| hypothetical protein | HMPREF1534_01081 | Not Available | Positive | 1258231 - 1258410 | 6887.13 |
| dna (cytosine-5-)-methyltransferase | HMPREF1534_01082 | Not Available | Positive | 1258413 - 1259588 | 44837.1 |
| hypothetical protein | HMPREF1534_01083 | Not Available | Positive | 1259594 - 1260031 | 16083.2 |
| hypothetical protein | HMPREF1534_01084 | Not Available | Positive | 1260028 - 1260900 | 33584.2 |
| hypothetical protein | HMPREF1534_01085 | Not Available | Positive | 1260913 - 1261182 | 10541.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


