Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01066 | Not Available | Negative | 1249950 - 1250324 | 13927.9 |
| hypothetical protein | HMPREF1534_01067 | Not Available | Positive | 1250466 - 1250657 | 7200.8 |
| hypothetical protein | HMPREF1534_01068 | Not Available | Positive | 1250670 - 1250867 | 7435.46 |
| hypothetical protein | HMPREF1534_01069 | Not Available | Positive | 1250887 - 1251099 | 8118.91 |
| hypothetical protein | HMPREF1534_01070 | Not Available | Positive | 1251111 - 1251380 | 10502.7 |
| Trna-undet | Not Available | Not Available | Positive | 1251384 - 1251473 | Not Available |
| hypothetical protein | HMPREF1534_01072 | Not Available | Positive | 1251501 - 1253471 | 75752.5 |
| hypothetical protein | HMPREF1534_01073 | Not Available | Positive | 1253499 - 1254389 | 32090.7 |
| hypothetical protein | HMPREF1534_01074 | Not Available | Positive | 1254401 - 1255150 | 27880.4 |
| hypothetical protein | HMPREF1534_01075 | Not Available | Positive | 1255202 - 1255381 | 6632.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


