Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01016 | Not Available | Positive | 1189552 - 1189884 | 12339.6 |
| hypothetical protein | HMPREF1534_01017 | Not Available | Positive | 1190195 - 1190425 | 8664.22 |
| hypothetical protein | HMPREF1534_01018 | Not Available | Positive | 1190427 - 1191581 | 43368.4 |
| hypothetical protein | HMPREF1534_01019 | Not Available | Positive | 1192048 - 1192692 | 24876.0 |
| hypothetical protein | HMPREF1534_01020 | Not Available | Positive | 1192689 - 1193492 | 30762.8 |
| hypothetical protein | HMPREF1534_01021 | Not Available | Positive | 1193672 - 1194577 | 34978.8 |
| hypothetical protein | HMPREF1534_01022 | Not Available | Positive | 1195157 - 1195795 | 23939.3 |
| hypothetical protein | HMPREF1534_01023 | Not Available | Negative | 1196051 - 1200553 | 167894.0 |
| hypothetical protein | HMPREF1534_01024 | Not Available | Negative | 1200618 - 1201181 | 21067.8 |
| na+/h+ antiporter nhac | HMPREF1534_01025 | Not Available | Positive | 1201376 - 1202815 | 51244.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


