Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00087 | Not Available | - | 104148 - 106655 | 96491.0 |
| hypothetical protein | HMPREF1534_00088 | Not Available | + | 107341 - 107625 | 10382.9 |
| 6-phosphofructokinase 2 | HMPREF1534_00089 | Not Available | - | 107779 - 108759 | 35456.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HMPREF1534_00090 | Not Available | - | 108826 - 109707 | 33269.0 |
| cytidylate kinase | HMPREF1534_00091 | Not Available | - | 109700 - 110389 | 25922.0 |
| tonb family domain-containing protein | HMPREF1534_00092 | Not Available | + | 110580 - 111263 | 25634.9 |
| hypothetical protein | HMPREF1534_00093 | Not Available | + | 111340 - 112317 | 37076.1 |
| tatd family hydrolase | HMPREF1534_00094 | Not Available | + | 112317 - 113090 | 29159.1 |
| Trna-ser | Not Available | Not Available | + | 113259 - 113346 | Not Available |
| hypothetical protein | HMPREF1534_00096 | Not Available | + | 113432 - 114196 | 27364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


