Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger mucosus |
| Strain | DSM 16094 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923609 bp
Thymine Count
932728 bp
Guanine Count
1919657 bp
Cytosine Count
1895451 bp
Genome Length
5671487 bp
Protein-coding Genes
5570 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-deoxy-d-gluconate 3-dehydrogenase | Salmuc_04019 | Not Available | - | 5557126 - 5557665 | 18611.1 |
| transcriptional regulator, iclr family | Salmuc_04020 | Not Available | - | 5558450 - 5559274 | 30135.1 |
| rhamnogalacturonides degradation protein rhin | Salmuc_04021 | Not Available | + | 5559494 - 5560612 | 42781.1 |
| trap-type c4-dicarboxylate transport system, periplasmic component | Salmuc_04022 | Not Available | + | 5560653 - 5561627 | 35529.7 |
| tripartite atp-independent periplasmic transporter, dctq component | Salmuc_04023 | Not Available | + | 5561624 - 5562139 | 18515.3 |
| putative rhamnogalacturonide-specific trap-type transporter, large transmembrane component rhic | Salmuc_04024 | Not Available | + | 5562144 - 5563442 | 44367.6 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | Salmuc_04025 | Not Available | + | 5563480 - 5564304 | 30290.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | Salmuc_04026 | Not Available | + | 5564304 - 5565047 | 25184.9 |
| trap-type c4-dicarboxylate transport system, periplasmic component | Salmuc_04027 | Not Available | + | 5565505 - 5566368 | 31531.8 |
| trap-type transport system, small permease component, predicted n-acetylneuraminate transporter | Salmuc_04028 | Not Available | + | 5566451 - 5566957 | 18298.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
