Agrobacterium tumefaciens str. Cherry 2E-2-2

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. Cherry 2E-2-2 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This strain is an aerobic organism, indicating its reliance on oxygen for respiration, which aligns with its ecological versatility as it is found in multiple habitats. The rod shape and Gram-negative classification suggest that A. tumefaciens str. Cherry 2E-2-2 possesses a thin peptidoglycan layer surrounded by an outer membrane, characteristic of its genus and contributing to its adaptability in various environments. This adaptability may facilitate its survival in diverse ecological niches, potentially allowing it to engage in complex interactions with plants and other microorganisms. Understanding the traits of A. tumefaciens str. Cherry 2E-2-2 can provide insights into its role in soil ecosystems, where its metabolic versatility may influence nutrient cycling and plant health. This bacterium's ability to thrive in multiple habitats underscores its ecological significance and potential as a model organism for studying plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
StrainCherry 2E-2-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. Cherry 2E-2-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens str. Cherry 2E-2-2


Gene Summary

Adenine Count

1086899 bp

Thymine Count

1089154 bp

Guanine Count

1625328 bp

Cytosine Count

1623912 bp

Genome Length

5425293 bp

Protein-coding Genes

5033 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporterH009_00305Not AvailablePositive53591 - 5460437870.1
abc transporter, membrane spanning proteinH009_00310Not AvailablePositive54606 - 5576641616.0
alpha-glucosidaseH009_00315Not AvailablePositive55804 - 5745962042.5
abc transporter, nucleotide binding/atpase proteinH009_00320Not AvailablePositive57480 - 5856839626.4
hypothetical proteinH009_00325Not AvailablePositive58753 - 5916616201.8
hypothetical proteinH009_00330Not AvailableNegative59190 - 6056949022.2
phosphogluconate dehydrataseH009_00335Not AvailableNegative60771 - 6259164623.9
6-phosphogluconolactonaseH009_00340Not AvailableNegative62720 - 6341825017.2
glucose-6-phosphate 1-dehydrogenaseH009_00345Not AvailableNegative63429 - 6490454963.8
oxidoreductaseH009_00350Not AvailableNegative65041 - 6632746638.8

Displaying genes 81 – 90 of 5092 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.