Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| modification methylase | EBMC1_01155 | Not Available | - | 258994 - 260520 | 56830.0 |
| dna mismatch endonuclease vsr | EBMC1_01160 | Not Available | + | 260589 - 261047 | 17270.9 |
| transposase is3/is911 family protein | EBMC1_01165 | Not Available | + | 261295 - 261573 | 10659.9 |
| integrase catalytic subunit | EBMC1_01170 | Not Available | + | 261612 - 262466 | 32349.8 |
| hypothetical protein | EBMC1_01175 | Not Available | - | 262630 - 263136 | 18364.1 |
| excalibur | EBMC1_01180 | Not Available | - | 263090 - 263338 | 8459.73 |
| repb plasmid partition | EBMC1_01185 | Not Available | - | 264485 - 265426 | 34859.2 |
| parb family protein | EBMC1_01190 | Not Available | - | 265413 - 266315 | 33495.1 |
| recombinase | EBMC1_01195 | Not Available | - | 266312 - 268000 | 63283.5 |
| hypothetical protein | EBMC1_01200 | Not Available | + | 267999 - 268403 | 14890.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.