Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein disulfide isomerase | EBMC1_00210 | Not Available | + | 40458 - 40961 | 17851.4 |
| short-chain dehydrogenase/reductase sdr | EBMC1_00215 | Not Available | + | 40961 - 41740 | 26648.7 |
| peptidase s10, serine carboxypeptidase | EBMC1_00220 | Not Available | + | 41856 - 43460 | 58075.0 |
| hypothetical protein | EBMC1_00225 | Not Available | + | 43513 - 44493 | 34664.1 |
| sua5/ycio/yrdc/ywlc | EBMC1_00230 | Not Available | - | 44490 - 45422 | 30730.0 |
| acyl-coa dehydrogenase-like protein | EBMC1_00235 | Not Available | + | 45500 - 47242 | 61328.3 |
| diguanylate phosphodiesterase | EBMC1_00240 | Not Available | + | 47356 - 49647 | 83624.8 |
| ribonucleotide-diphosphate reductase subunit alpha | EBMC1_00245 | Not Available | + | 50316 - 52271 | 72152.3 |
| membrane protease subunit | EBMC1_00250 | Not Available | + | 52284 - 52673 | 13626.5 |
| ribonucleotide-diphosphate reductase subunit beta | EBMC1_00255 | Not Available | + | 52705 - 53766 | 40936.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.