Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase fold-3 protein | EBMC1_04294 | Not Available | Negative | 890917 - 891840 | 32532.4 |
| sphingosine kinase | EBMC1_04299 | Not Available | Positive | 891939 - 892808 | 30425.1 |
| metallophosphoesterase | EBMC1_04304 | Not Available | Positive | 892808 - 893653 | 30985.6 |
| hypothetical protein | EBMC1_04309 | Not Available | Positive | 893707 - 894807 | 39965.1 |
| hypothetical protein | EBMC1_04314 | Not Available | Positive | 894804 - 895847 | 37338.2 |
| peptidase c56, pfpi | EBMC1_04319 | Not Available | Negative | 895844 - 896404 | 19928.7 |
| outer membrane autotransporter barrel domain-containing protein | EBMC1_04324 | Not Available | Negative | 896543 - 900028 | 118646.0 |
| 30s ribosomal protein s9 | EBMC1_04329 | Not Available | Negative | 900236 - 900733 | 17814.4 |
| 50s ribosomal protein l13 | EBMC1_04334 | Not Available | Negative | 900733 - 901212 | 17486.3 |
| hypothetical protein | EBMC1_04339 | Not Available | Negative | 901391 - 902170 | 27855.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.