Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis protein ribf | EBMC1_03894 | Not Available | Positive | 806565 - 807494 | 33538.0 |
| glycerophosphoryl diester phosphodiesterase | EBMC1_03899 | Not Available | Positive | 807545 - 808585 | 38112.7 |
| excinuclease abc subunit c | EBMC1_03904 | Not Available | Positive | 808643 - 808933 | 11604.9 |
| isoleucyl-trna ligase | EBMC1_03909 | Not Available | Positive | 809094 - 812081 | 111715.0 |
| lipoprotein signal peptidase | EBMC1_03914 | Not Available | Positive | 812078 - 812602 | 18886.4 |
| hypothetical protein | EBMC1_03919 | Not Available | Positive | 812630 - 813049 | 14149.6 |
| hypothetical protein | EBMC1_03924 | Not Available | Negative | 813099 - 813773 | 25042.3 |
| hypothetical protein | EBMC1_03929 | Not Available | Negative | 813795 - 814355 | 20644.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EBMC1_03934 | Not Available | Negative | 814352 - 816280 | 68575.0 |
| hypothetical protein | EBMC1_03939 | Not Available | Negative | 816327 - 816554 | 7861.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.