Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | EBMC1_02885 | Not Available | Positive | 617362 - 617964 | 20693.4 |
| extradiol ring-cleavage dioxygenase | EBMC1_02890 | Not Available | Positive | 618012 - 618794 | 27558.8 |
| pseudouridine synthase | EBMC1_02895 | Not Available | Positive | 618802 - 619485 | 24764.7 |
| hypothetical protein | EBMC1_02900 | Not Available | Positive | 619478 - 619879 | 14387.5 |
| hypothetical protein | EBMC1_02905 | Not Available | Positive | 619892 - 620479 | 21268.4 |
| type iv pilus assembly pilz | EBMC1_02910 | Not Available | Positive | 620568 - 620891 | 12055.4 |
| hypothetical protein | EBMC1_02915 | Not Available | Negative | 620888 - 621313 | 15771.0 |
| 2og-fe(ii) oxygenase | EBMC1_02920 | Not Available | Positive | 621467 - 622396 | 33966.3 |
| peptidase m16-like protein | EBMC1_02925 | Not Available | Negative | 622439 - 625339 | 104588.0 |
| diguanylate cyclase/phosphodiesterase | EBMC1_02930 | Not Available | Negative | 625383 - 626507 | 40396.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.