Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EBMC1_02535 | Not Available | Positive | 547887 - 549959 | 73574.6 |
| hypothetical protein | EBMC1_02540 | Not Available | Negative | 550026 - 550565 | 19184.4 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | EBMC1_02545 | Not Available | Negative | 550595 - 551335 | 25134.3 |
| malonyl coa-acyl carrier protein transacylase | EBMC1_02550 | Not Available | Negative | 551358 - 552296 | 32190.8 |
| peptidase u61, ld-carboxypeptidase a | EBMC1_02555 | Not Available | Negative | 552423 - 553250 | 29603.4 |
| udp-n-acetylmuramate--l-alanine ligase | EBMC1_02560 | Not Available | Positive | 553353 - 554741 | 47895.8 |
| 30s ribosomal protein s6 | EBMC1_02565 | Not Available | Positive | 554900 - 555265 | 13814.5 |
| 30s ribosomal protein s18 | EBMC1_02570 | Not Available | Positive | 555277 - 555501 | 8555.73 |
| 50s ribosomal protein l9 | EBMC1_02575 | Not Available | Positive | 555515 - 556144 | 22442.3 |
| thioredoxin reductase | EBMC1_02580 | Not Available | Negative | 556396 - 557361 | 33822.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.