Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 478482 - 478557 | Not Available |
| signal transduction histidine kinase lyts | EBMC1_02235 | Not Available | Negative | 478620 - 479750 | 41780.1 |
| two component, sigma54 specific, transcriptional regulator, fis family protein | EBMC1_02240 | Not Available | Negative | 479870 - 481192 | 48838.5 |
| histidine kinase | EBMC1_02245 | Not Available | Negative | 481189 - 482931 | 62275.0 |
| c4-dicarboxylate transporter dcta | EBMC1_02250 | Not Available | Positive | 483070 - 484455 | 48132.9 |
| twin-arginine translocation pathway signal sequence domain-containing protein | EBMC1_02255 | Not Available | Positive | 484452 - 485396 | 33795.4 |
| tonb-dependent receptor | EBMC1_02260 | Not Available | Positive | 485426 - 488491 | 109671.0 |
| zinc carboxypeptidase | EBMC1_02265 | Not Available | Positive | 488496 - 489698 | 42087.1 |
| hypothetical protein | EBMC1_02270 | Not Available | Negative | 490132 - 491031 | 32688.6 |
| tonb-dependent receptor | EBMC1_02275 | Not Available | Negative | 491058 - 493517 | 88619.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.