Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbl | EBMC1_01785 | Not Available | Negative | 385811 - 387115 | 44091.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 387331 - 388829 | Not Available |
| conjugal transfer protein trbj | EBMC1_01790 | Not Available | Negative | 387236 - 387994 | 27384.8 |
| conjugal transfer atpase trbe | EBMC1_01795 | Not Available | Negative | 388014 - 390434 | 88036.2 |
| conjugal transfer protein trbd | EBMC1_01800 | Not Available | Negative | 390428 - 390691 | 9101.27 |
| conjugal transfer protein trbc | EBMC1_01805 | Not Available | Negative | 390688 - 391023 | 11425.2 |
| conjugal transfer protein trbb | EBMC1_01810 | Not Available | Negative | 391020 - 392012 | 35662.2 |
| helix-turn-helix protein, copg | EBMC1_01815 | Not Available | Negative | 392009 - 392407 | 14638.6 |
| conjugal transfer coupling protein trag | EBMC1_01820 | Not Available | Negative | 392410 - 394464 | 75261.7 |
| hypothetical protein | EBMC1_01825 | Not Available | Positive | 394651 - 396234 | 59401.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.