Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage spo1 dna polymerase-related protein | EBMC1_17012 | Not Available | + | 3548605 - 3550035 | 53519.1 |
| putative mrna 3-end processing factor | EBMC1_17017 | Not Available | + | 3550035 - 3551045 | 36752.9 |
| atp-dependent dna ligase | EBMC1_17022 | Not Available | + | 3551042 - 3552760 | 62982.2 |
| superoxide dismutase | EBMC1_17027 | Not Available | + | 3552849 - 3553463 | 22321.9 |
| l-serine dehydratase 1 | EBMC1_17032 | Not Available | + | 3553635 - 3555014 | 48248.8 |
| s-(hydroxymethyl)glutathione dehydrogenase | EBMC1_17037 | Not Available | + | 3555216 - 3556328 | 39437.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase | EBMC1_17042 | Not Available | + | 3556347 - 3556733 | 13192.7 |
| formyltetrahydrofolate deformylase | EBMC1_17047 | Not Available | + | 3556735 - 3557607 | 32003.4 |
| glyoxalase/bleomycin resistance protein/dioxygenase | EBMC1_17052 | Not Available | + | 3557663 - 3558043 | 13172.6 |
| ybak/prolyl-trna synthetase associated domain-containing protein | EBMC1_17057 | Not Available | + | 3558058 - 3558561 | 17229.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.