Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. MC1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
640752 bp
Thymine Count
632417 bp
Guanine Count
1178185 bp
Cytosine Count
1202109 bp
Genome Length
3653464 bp
Protein-coding Genes
3419 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two component, sigma54 specific, fis family transcriptional regulator | EBMC1_16704 | Not Available | - | 3487446 - 3488867 | 51312.3 |
| signal transduction histidine kinase, nitrogen specific, ntrb | EBMC1_16709 | Not Available | - | 3488864 - 3489967 | 39451.4 |
| dihydrouridine synthase tim-barrel protein nifr3 | EBMC1_16714 | Not Available | - | 3489964 - 3490962 | 36121.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EBMC1_16719 | Not Available | + | 3491060 - 3492244 | 40418.4 |
| cina-like protein | EBMC1_16724 | Not Available | + | 3492365 - 3492805 | 15371.0 |
| cyclase/dehydrase | EBMC1_16729 | Not Available | - | 3492748 - 3493227 | 17893.4 |
| lipoyl synthase | EBMC1_16734 | Not Available | - | 3493235 - 3494188 | 35166.4 |
| carbonate dehydratase | EBMC1_16739 | Not Available | + | 3494225 - 3494863 | 23348.8 |
| cl- channel voltage-gated family protein | EBMC1_16744 | Not Available | + | 3494912 - 3496255 | 46287.4 |
| hypothetical protein | EBMC1_16749 | Not Available | - | 3496303 - 3496653 | 13527.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.