Paramagnetospirillum caucaseum strain SO-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Magnetospirillaceae

Genus

Paramagnetospirillum

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyMagnetospirillaceae
GenusParamagnetospirillum
SpeciesParamagnetospirillum caucaseum
Strainstrain SO-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paramagnetospirillum caucaseum strain SO-1

AONQ00000000.1

Gene Summary

Adenine Count

824717 bp

Thymine Count

832253 bp

Guanine Count

1615813 bp

Cytosine Count

1597731 bp

Genome Length

4870514 bp

Protein-coding Genes

4494 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
holliday junction dna helicase ruvbH261_19783Not Available-4142740 - 414378037734.4
holliday junction dna helicase ruvaH261_19788Not Available-4143777 - 414440921653.3
holliday junction resolvaseH261_19793Not Available-4144406 - 414487916479.0
hypothetical proteinH261_19798Not Available-4144906 - 414565526912.4
methyl-accepting chemotaxis proteinH261_19803Not Available+4145877 - 414795273082.7
thioredoxin (h-type,trx-h)H261_19808Not Available-4147963 - 414834313502.5
abc-type transport system proteinH261_19813Not Available-4148446 - 414875110733.0
hypothetical proteinH261_19818Not Available-4149075 - 414989329048.2
5-formyltetrahydrofolate cyclo-ligaseH261_19823Not Available-4149890 - 415047420467.8
hypothetical proteinH261_19828Not Available-4150659 - 415098511513.9

Displaying genes 3961 – 3970 of 4696 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

102 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 102 metabolites