Brevundimonas diminuta 470-4

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Brevundimonas

Description

Brevundimonas diminuta 470-4 is a Gram-negative anaerobic bacterium characterized by its ability to thrive in environments devoid of oxygen. This microbe exhibits a unique metabolic versatility that allows it to utilize alternative electron acceptors, which is typical for anaerobes. The Gram-negative nature of B. diminuta 470-4 suggests a complex outer membrane structure, potentially influencing its interactions with the surrounding environment and other microorganisms. As an anaerobe, B. diminuta 470-4 is adapted to conditions that limit the availability of oxygen, which may include diverse habitats such as sediments, decaying organic matter, or certain niche environments in the human microbiome. The lack of oxygen not only shapes its metabolic pathways but may also influence its ecological role in nutrient cycling and organic matter decomposition. Further understanding of B. diminuta 470-4 could reveal insights into its potential applications in bioremediation or biotechnological processes, particularly in anaerobic digestion or waste treatment, where its metabolic capabilities could be harnessed to break down complex organic compounds. The successful adaptation of this bacterium to anaerobic conditions underscores the broader ecological significance of anaerobic microorganisms in maintaining ecosystem balance and facilitating nutrient turnover in oxygen-limited environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusBrevundimonas
SpeciesBrevundimonas diminuta
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevundimonas diminuta 470-4


Gene Summary

Adenine Count

552237 bp

Thymine Count

550227 bp

Guanine Count

1119287 bp

Cytosine Count

1114171 bp

Genome Length

3335922 bp

Protein-coding Genes

3496 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Pura-like adenylosuccinate synthetaseHMPREF0185_03068Not Available-2885764 - 288705945969.3
phosphoserine transaminaseHMPREF0185_03069Not Available-2887151 - 288831142092.2
Chaperone protein dnajHMPREF0185_03070Not Available-2888363 - 288929532665.7
Tail proteinHMPREF0185_03071Not Available-2889409 - 288988816873.9
Tail proteinHMPREF0185_03072Not Available-2889892 - 289050321813.0
hypothetical proteinHMPREF0185_03073Not Available+2890616 - 289137126585.4
Tail tape-measure proteinHMPREF0185_03074Not Available-2891541 - 289206816827.0
hypothetical proteinHMPREF0185_03075Not Available-2892061 - 28922346463.87
hypothetical proteinHMPREF0185_03076Not Available-2892234 - 28925369929.24
Gene transfer aget (gta) orfg9-like phage major tail proteinHMPREF0185_03077Not Available-2892587 - 289299714220.8

Displaying genes 1 – 10 of 3557 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

300 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 300 metabolites