Thaumarchaeota archaeon SCGC AB-539-E09

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Order

Family

Genus

Description

Thaumarchaeota archaeon SCGC AB-539-E09 is characterized by having a single replicon, which is an important trait for understanding its genomic structure and replication behavior. The genome of this archaeon is accessible under the accession number ALXK00000000.1, providing a valuable resource for researchers interested in the genetic and metabolic pathways of this group. Thaumarchaeota are known for their role in biogeochemical processes, particularly in the nitrogen cycle, where they contribute to ammonia oxidation. This capability is significant in various ecosystems, including marine and terrestrial environments, suggesting that SCGC AB-539-E09 may play a role in nutrient cycling and ecosystem dynamics. The presence of a single replicon indicates a streamlined genomic organization, which may enhance the efficiency of replication and adaptability to environmental changes. Understanding the genomic features and ecological roles of Thaumarchaeota, including SCGC AB-539-E09, can provide insights into their evolutionary adaptations and contributions to microbial communities. In summary, Thaumarchaeota archaeon SCGC AB-539-E09, with its single replicon and accessible genomic data, represents a key organism for studying the ecological roles of archaea in nutrient cycling, particularly in relation to ammonia oxidation within various habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thaumarchaeota archaeon SCGC AB-539-E09


Gene Summary

Adenine Count

150995 bp

Thymine Count

149104 bp

Guanine Count

113695 bp

Cytosine Count

115375 bp

Genome Length

529171 bp

Protein-coding Genes

650 genes

Non-Coding Genes

7 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding protein involved in rrna processingMCGE09_00308Not AvailableNegative182254 - 1824999119.18
signal recognition particle 19 kda proteinMCGE09_00309Not AvailableNegative182575 - 18286510753.2
ssu ribosomal protein s8eMCGE09_00310Not AvailableNegative182906 - 18328914205.2
putative transcriptional regulatorMCGE09_00311Not AvailableNegative183419 - 18404824206.2
condensin subunit scpaMCGE09_00312Not AvailableNegative184041 - 18470325826.4
chromosome segregation atpaseMCGE09_00313Not AvailableNegative184705 - 188250134867.0
undecaprenyl diphosphate synthaseMCGE09_00314Not AvailableNegative188593 - 18937530057.3
putative membrane proteinMCGE09_00315Not AvailableNegative189458 - 19060342072.7
transcription initiation factor tfiiib, brf1 subunit/transcription initiation factor tfiibMCGE09_00316Not AvailableNegative190644 - 19160335544.7
Trna-glnNot AvailableNot AvailablePositive191949 - 192024Not Available

Displaying genes 211 – 220 of 657 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.