Helicobacter pylori Hp P-23

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain Hp P-23 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and presence as single cells. This organism thrives at an optimal temperature of 37.0°C, which aligns with the typical human body temperature, suggesting its adaptation to a host-associated habitat. H. pylori is predominantly known for colonizing the gastric epithelium, where it can influence the host's gastric environment. Its microaerophilic nature indicates that it requires reduced oxygen levels for optimal growth, which is consistent with the conditions found within the stomach. The unique morphology of H. pylori, particularly its spirilla shape, may facilitate its motility through the viscous gastric mucus layer, potentially enhancing its ability to colonize the gastric niche. The ecological role of H. pylori in the human stomach may extend beyond pathogenicity, as it has been suggested that this microbe could play a role in modulating gastric acidity and influencing local microbial communities. This duality highlights the importance of H. pylori in both health and disease contexts, necessitating further investigation into its interactions within the host and its impact on the overall gastric microbiome.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHp P-23

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori Hp P-23
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori Hp P-23


Gene Summary

Adenine Count

503121 bp

Thymine Count

502536 bp

Guanine Count

325090 bp

Cytosine Count

312778 bp

Genome Length

1643525 bp

Protein-coding Genes

1683 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1343014 - 1343026Not Available
Hypothetical proteinHPHPP23_1402Not Available+1348025 - 134837812990.5
hypothetical proteinHPHPP23_1403Not Available+1348365 - 13484904750.02
Integrase/recombinaseHPHPP23_1404Not Available+1348487 - 134877711574.1
Integrase/recombinaseHPHPP23_1405P96629+1348861 - 134963429885.4
Hypothetical proteinHPHPP23_1406Not Available+1349631 - 13498378302.14
Putative transcriptional regulatorHPHPP23_1407Not Available+1349839 - 135014712152.9
Putative phage replication proteinHPHPP23_1408Not Available+1350144 - 135107336474.1
Hypothetical proteinHPHPP23_1409Not Available+1351083 - 135143914446.5
Hypothetical proteinHPHPP23_1410Not Available+1351411 - 13515364967.2

Displaying genes 1 – 10 of 1739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

92 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 92 metabolites