Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium sp. AP12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
955216 bp
Thymine Count
957743 bp
Guanine Count
1850173 bp
Cytosine Count
1848485 bp
Genome Length
5611617 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enolase superfamily enzyme related to l-alanine-dl-glutamate epimerase | PMI02_00290 | Not Available | + | 282902 - 284056 | 41139.8 |
| major facilitator superfamily transporter | PMI02_00291 | Not Available | + | 284053 - 285312 | 44763.5 |
| tonb-dependent receptor | PMI02_00292 | Not Available | + | 285394 - 288141 | 100075.0 |
| protein of unknown function (duf1593) | PMI02_00293 | Not Available | + | 288204 - 289613 | 52321.6 |
| transcriptional regulator of sugar metabolism | PMI02_00294 | Not Available | - | 289618 - 290391 | 27401.3 |
| l-rhamnose-proton symport protein (rhat) | PMI02_00295 | Not Available | - | 290464 - 291537 | 38207.3 |
| pentulose/hexulose kinase | PMI02_00296 | Not Available | - | 291571 - 293028 | 52506.2 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | PMI02_00297 | Not Available | + | 293117 - 295261 | 76248.3 |
| l-rhamnose catabolism isomerase | PMI02_00298 | Not Available | + | 295287 - 296579 | 46830.0 |
| sterol desaturase | PMI02_00299 | Not Available | + | 296778 - 297770 | 37857.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.