Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium sp. AP12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
955216 bp
Thymine Count
957743 bp
Guanine Count
1850173 bp
Cytosine Count
1848485 bp
Genome Length
5611617 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI02_00170 | Not Available | - | 133680 - 135260 | 56817.9 |
| membrane carboxypeptidase/penicillin-binding protein | PMI02_00171 | Not Available | - | 135314 - 137860 | 92785.5 |
| n-acetylmuramoyl-l-alanine amidase | PMI02_00172 | Not Available | - | 137924 - 138793 | 30087.9 |
| ribonuclease, rne/rng family | PMI02_00173 | Not Available | + | 139448 - 142276 | 103605.0 |
| anaerobic dehydrogenase, typically selenocysteine-containing | PMI02_00174 | Not Available | - | 142340 - 144493 | 77686.2 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI02_00175 | Not Available | - | 144588 - 145340 | 25425.6 |
| succinate dehydrogenase and fumarate reductase iron-sulfur protein | PMI02_00176 | Not Available | + | 145691 - 146473 | 29397.4 |
| hypothetical protein, possibly involved in aromatic compounds catabolism | PMI02_00177 | Not Available | + | 146501 - 146965 | 16619.9 |
| putative atpase | PMI02_00178 | Not Available | + | 146962 - 148077 | 41119.6 |
| eal domain-containing protein | PMI02_00179 | Not Available | - | 148479 - 150782 | 85048.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.