Pseudomonas sp. GM25

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. GM25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. GM25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. GM25

AKJQ00000000.1

Gene Summary

Adenine Count

1239376 bp

Thymine Count

1244479 bp

Guanine Count

1935255 bp

Cytosine Count

1931497 bp

Genome Length

6350607 bp

Protein-coding Genes

5644 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose/sorbosone dehydrogenasePMI24_00014Not AvailableNegative9599 - 1091246778.4
hypothetical proteinPMI24_00015Not AvailableNegative10978 - 1156222066.0
cob(i)alamin adenosyltransferasePMI24_00017Not AvailablePositive12036 - 1264722605.3
Ncrna_class:otherNot AvailableNot AvailablePositive12445 - 12510Not Available
cobyrinic acid a,c-diamide synthasePMI24_00018Not AvailablePositive12644 - 1393946076.5
cob(ii)yrinic acid a,c-diamide reductasePMI24_00019Not AvailablePositive13936 - 1458624308.4
cobalamin biosynthesis protein cobdPMI24_00020Not AvailablePositive14583 - 1549132861.6
l-threonine-o-3-phosphate decarboxylasePMI24_00021Not AvailablePositive15484 - 1649437316.0
cobyric acid synthase cobqPMI24_00022Not AvailablePositive16491 - 1795752142.6
adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferasePMI24_00023Not AvailablePositive17945 - 1846618915.2

Displaying genes 61 – 70 of 5752 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

466 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 466 metabolites

Health Effects

No health effects information available for this bacterium.