Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative efflux protein, mate family | PMI12_00024 | Not Available | - | 20996 - 22411 | 49280.4 |
| hypothetical protein | PMI12_00025 | Not Available | - | 22408 - 22983 | 20906.7 |
| hypothetical protein | PMI12_00026 | Not Available | - | 23039 - 23482 | 16432.4 |
| hypothetical protein | PMI12_00027 | Not Available | - | 23542 - 24048 | 19377.6 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_00028 | Not Available | + | 24563 - 25357 | 29197.1 |
| signal transduction histidine kinase | PMI12_00029 | Not Available | + | 25366 - 26334 | 35267.1 |
| transcriptional accessory protein | PMI12_00030 | Not Available | + | 26414 - 28789 | 86267.8 |
| hypothetical protein | PMI12_00031 | Not Available | + | 28824 - 29897 | 40111.9 |
| hypothetical protein | PMI12_00032 | Not Available | - | 29861 - 30226 | 12395.6 |
| putative translation initiation inhibitor, yjgf family | PMI12_00033 | Not Available | - | 30226 - 30606 | 13781.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.