Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfur transfer protein involved in thiamine biosynthesis | PMI12_05704 | Not Available | - | 5995724 - 5995927 | 7262.73 |
| glycine/d-amino acid oxidase, deaminating | PMI12_05705 | Not Available | - | 5995924 - 5997015 | 38789.1 |
| phosphomethylpyrimidine kinase | PMI12_05706 | Not Available | + | 5997051 - 5997998 | 32063.8 |
| purine-cytosine permease-like transporter | PMI12_05707 | Not Available | - | 5997943 - 5999280 | 46473.3 |
| transcriptional regulator | PMI12_05709 | Not Available | - | 5999645 - 6000379 | 26536.2 |
| glutamate-1-semialdehyde aminotransferase | PMI12_05710 | Not Available | + | 6000493 - 6001797 | 46715.0 |
| thioredoxin reductase | PMI12_05711 | Not Available | - | 6001757 - 6002809 | 37020.6 |
| ferredoxin | PMI12_05712 | Not Available | - | 6002812 - 6003141 | 12128.6 |
| sulfate adenylyltransferase, large subunit | PMI12_05713 | Not Available | - | 6003183 - 6004523 | 47712.8 |
| paps reductase/fad synthetase family protein | PMI12_05714 | Not Available | - | 6004523 - 6005476 | 35982.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.