Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dioxygenase, isopenicillin n synthase | PMI12_05684 | Not Available | - | 5979097 - 5980098 | 36666.8 |
| abc-type polar amino acid transport system, atpase component | PMI12_05685 | Not Available | - | 5980095 - 5980838 | 27637.5 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_05686 | Not Available | - | 5980835 - 5981545 | 26158.0 |
| abc-type amino acid transport system, permease component | PMI12_05687 | Not Available | - | 5981558 - 5982253 | 25444.5 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_05688 | Not Available | - | 5982422 - 5983249 | 29615.7 |
| putative paraquat-inducible protein b | PMI12_05689 | Not Available | + | 5983436 - 5984632 | 42794.1 |
| hemoglobin like protein | PMI12_05690 | Not Available | + | 5984660 - 5985079 | 16014.1 |
| nad(fad)-dependent dehydrogenase | PMI12_05691 | Not Available | + | 5985118 - 5986341 | 42520.1 |
| hypothetical protein | PMI12_05692 | Not Available | - | 5986485 - 5987141 | 23634.7 |
| dna repair protein | PMI12_05693 | Not Available | - | 5987141 - 5987818 | 24620.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.