Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| channel protein, hemolysin iii family | PMI12_05674 | Not Available | - | 5969306 - 5969995 | 24576.3 |
| response regulator consisting of a chey-like receiver domain and a fis-type hth domain | PMI12_05675 | Not Available | - | 5970032 - 5970577 | 19687.5 |
| histidine kinase | PMI12_05676 | Not Available | - | 5970558 - 5971976 | 51381.4 |
| hypothetical protein | PMI12_05677 | Not Available | - | 5971936 - 5972724 | 28532.8 |
| cytochrome o ubiquinol oxidase subunit iv | PMI12_05678 | Not Available | - | 5972724 - 5973128 | 14759.3 |
| cytochrome o ubiquinol oxidase, subunit iii | PMI12_05679 | Not Available | - | 5973125 - 5973787 | 24171.7 |
| cytochrome o ubiquinol oxidase, subunit i | PMI12_05680 | Not Available | - | 5973780 - 5975783 | 74576.7 |
| cytochrome o ubiquinol oxidase subunit ii | PMI12_05681 | Not Available | - | 5975785 - 5976858 | 39635.4 |
| arabinose efflux permease family protein | PMI12_05682 | Not Available | + | 5976992 - 5978332 | 47412.7 |
| haloacid dehalogenase superfamily protein, subfamily ia, variant 3 with third motif having dd or ed | PMI12_05683 | Not Available | + | 5978397 - 5979086 | 24291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.