Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_05614 | Not Available | - | 5906852 - 5908234 | 48087.9 |
| enoyl-coa hydratase/carnithine racemase | PMI12_05615 | Not Available | - | 5908393 - 5909169 | 28977.6 |
| putative tim-barrel fold metal-dependent hydrolase | PMI12_05616 | Not Available | - | 5909215 - 5910048 | 31306.9 |
| putative nadph-quinone reductase (modulator of drug activity b) | PMI12_05617 | Not Available | - | 5910064 - 5910786 | 27084.3 |
| enoyl-coa hydratase/carnithine racemase | PMI12_05618 | Not Available | - | 5910783 - 5911517 | 26818.3 |
| indolepyruvate ferredoxin oxidreductase, alpha/beta subunit | PMI12_05619 | Not Available | - | 5911514 - 5915056 | 128551.0 |
| hypothetical protein | PMI12_05620 | Not Available | - | 5915286 - 5915573 | 9912.82 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_05621 | Not Available | + | 5915688 - 5916680 | 37062.3 |
| camp-binding protein | PMI12_05622 | Not Available | + | 5916724 - 5917446 | 26692.4 |
| 2-hydroxychromene-2-carboxylate isomerase | PMI12_05623 | Not Available | - | 5917489 - 5918100 | 22750.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.