Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05523 | Not Available | + | 5800460 - 5801194 | 25364.9 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_05524 | Not Available | + | 5801282 - 5802130 | 30690.5 |
| 2-hydroxy-3-oxopropionate reductase | PMI12_05525 | Not Available | - | 5802248 - 5803156 | 30955.7 |
| hydroxypyruvate isomerase | PMI12_05526 | Not Available | - | 5803180 - 5803965 | 28784.4 |
| glyoxylate carboligase | PMI12_05527 | Not Available | - | 5803986 - 5805776 | 64873.4 |
| transcriptional regulator | PMI12_05528 | Not Available | + | 5805890 - 5806795 | 33204.2 |
| lignostilbene-alpha,beta-dioxygenase-like enzyme | PMI12_05529 | Not Available | - | 5806818 - 5808314 | 54461.1 |
| hypothetical protein | PMI12_05530 | Not Available | - | 5808328 - 5808765 | 14957.8 |
| putative permease | PMI12_05531 | Not Available | - | 5808932 - 5810035 | 39397.2 |
| hypothetical protein | PMI12_05532 | Not Available | + | 5810480 - 5811208 | 25898.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.