Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | PMI12_05503 | Not Available | - | 5776227 - 5777108 | 32150.6 |
| gdp-mannose 4,6-dehydratase | PMI12_05504 | Not Available | - | 5777105 - 5778142 | 38656.4 |
| putative glycosyltransferase | PMI12_05505 | Not Available | + | 5778453 - 5782595 | 154127.0 |
| abc-type polysaccharide/polyol phosphate transport system, atpase component | PMI12_05506 | Not Available | - | 5782665 - 5783420 | 26930.8 |
| abc-type polysaccharide/polyol phosphate export system, permease component | PMI12_05507 | Not Available | - | 5783424 - 5784227 | 30611.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | PMI12_05508 | Not Available | - | 5784224 - 5785642 | 51514.3 |
| putative glycosyltransferase | PMI12_05509 | Not Available | + | 5785859 - 5787721 | 70149.9 |
| glycosyl transferase | PMI12_05510 | Not Available | + | 5787721 - 5788704 | 36384.9 |
| putative glycosyltransferase | PMI12_05511 | Not Available | - | 5788706 - 5789452 | 28128.0 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | PMI12_05512 | Not Available | + | 5789498 - 5790595 | 40153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.