Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenazine biosynthesis protein phzf family | PMI12_05481 | Not Available | - | 5753633 - 5754556 | 32329.8 |
| glutathione s-transferase | PMI12_05482 | Not Available | - | 5754672 - 5755313 | 24405.0 |
| putative threonine efflux protein | PMI12_05483 | Not Available | - | 5755328 - 5755966 | 22133.8 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_05484 | Not Available | - | 5755981 - 5757183 | 43197.5 |
| putative lactoylglutathione lyase | PMI12_05485 | Not Available | - | 5757242 - 5757649 | 14331.9 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_05486 | Not Available | - | 5757652 - 5758611 | 33280.6 |
| putative threonine efflux protein | PMI12_05487 | Not Available | - | 5758608 - 5759207 | 21038.5 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_05488 | Not Available | + | 5759321 - 5760745 | 52173.2 |
| hypothetical protein | PMI12_05489 | Not Available | + | 5760824 - 5761573 | 26269.2 |
| hypothetical protein | PMI12_05490 | Not Available | + | 5761619 - 5762899 | 44533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.