Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05379 | Not Available | + | 5654879 - 5655033 | 5255.27 |
| fad/fmn-dependent dehydrogenase | PMI12_05380 | Not Available | - | 5655121 - 5656545 | 50480.5 |
| hypothetical protein | PMI12_05381 | Not Available | + | 5656602 - 5657120 | 19079.8 |
| atp:cob(i)alamin adenosyltransferase | PMI12_05382 | Not Available | + | 5657135 - 5657728 | 21389.6 |
| hypothetical protein | PMI12_05383 | Not Available | + | 5657725 - 5658084 | 12196.4 |
| atpase component of abc-type sugar transporter | PMI12_05384 | Not Available | - | 5658230 - 5659264 | 37913.1 |
| barstar (barnase inhibitor) | PMI12_05385 | Not Available | - | 5659402 - 5659680 | 10083.8 |
| transposase | PMI12_05386 | Not Available | - | 5659693 - 5661321 | 60625.0 |
| transposase | PMI12_05387 | Not Available | - | 5661394 - 5661783 | 14425.9 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05388 | Not Available | - | 5662197 - 5662970 | 27630.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.