Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_00015 | Not Available | + | 11294 - 12742 | 49500.7 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 11329 - 11697 | Not Available |
| putative paraquat-inducible protein a | PMI12_00016 | Not Available | + | 12813 - 13454 | 23056.9 |
| putative paraquat-inducible protein a | PMI12_00017 | Not Available | + | 13451 - 14170 | 26118.1 |
| qaraquat-inducible protein b | PMI12_00018 | Not Available | + | 14167 - 15810 | 60114.1 |
| hypothetical protein | PMI12_00019 | Not Available | + | 15807 - 16427 | 21408.5 |
| drug resistance transporter, emrb/qaca subfamily | PMI12_00020 | Not Available | + | 16582 - 18183 | 54515.1 |
| transcriptional regulator | PMI12_00021 | Not Available | + | 18324 - 19397 | 38623.7 |
| phosphoglycerate dehydrogenase-like oxidoreductase | PMI12_00022 | Not Available | + | 19394 - 20395 | 35001.8 |
| hypothetical protein | PMI12_00023 | Not Available | + | 20502 - 20978 | 17783.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.