Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose pyrophosphatase | PMI12_00402 | Not Available | + | 389849 - 390340 | 17960.3 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | PMI12_00403 | Not Available | - | 390342 - 391409 | 39264.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_00404 | Not Available | + | 391637 - 393367 | 62712.8 |
| luciferase family oxidoreductase, group 1 | PMI12_00405 | Not Available | - | 393374 - 394366 | 35642.6 |
| hypothetical protein | PMI12_00406 | Not Available | - | 394439 - 395044 | 22348.1 |
| hypothetical protein | PMI12_00407 | Not Available | + | 395263 - 395985 | 26792.2 |
| hypothetical protein | PMI12_00408 | Not Available | - | 396064 - 396444 | 12098.1 |
| hypothetical protein | PMI12_00409 | Not Available | + | 396703 - 397179 | 17387.4 |
| hypothetical protein | PMI12_00410 | Not Available | - | 397189 - 397842 | 22699.0 |
| abc-type cobalt transport system, permease component cbiq | PMI12_00411 | Not Available | - | 397814 - 398407 | 21383.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.