Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-6-methylguanine dna methyltransferase | PMI12_00006 | Not Available | + | 1140 - 1676 | 18901.9 |
| arabinose efflux permease family protein | PMI12_00007 | Not Available | - | 1694 - 2917 | 41413.1 |
| 16s ribosomal rna | Not Available | Not Available | + | 3877 - 5293 | Not Available |
| transcriptional regulator | PMI12_00008 | Not Available | - | 2994 - 3881 | 32656.3 |
| arabinose efflux permease family protein | PMI12_00009 | Not Available | + | 4023 - 5126 | 38462.2 |
| hypothetical protein | PMI12_00010 | Not Available | - | 5243 - 5428 | 6982.81 |
| sugar phosphate permease | PMI12_00011 | Not Available | - | 5559 - 6857 | 47333.6 |
| zn-dependent protease with chaperone function | PMI12_00012 | Not Available | - | 6931 - 8793 | 68963.5 |
| hypothetical protein | PMI12_00013 | Not Available | + | 9090 - 9950 | 32674.7 |
| drug resistance transporter, bcr/cfla subfamily | PMI12_00014 | Not Available | + | 10080 - 11294 | 41934.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.