Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase/cystathionine gamma-synthase | PMI12_00372 | Not Available | - | 365113 - 366282 | 42174.0 |
| hypothetical protein | PMI12_00373 | Not Available | - | 366316 - 366768 | 16319.8 |
| transcriptional regulator | PMI12_00374 | Not Available | + | 366865 - 367800 | 34196.1 |
| copper chaperone | PMI12_00375 | Not Available | - | 367844 - 368035 | 6623.94 |
| hypothetical protein | PMI12_00376 | Not Available | - | 368262 - 368426 | 6116.47 |
| cytochrome c553 | PMI12_00377 | Not Available | - | 368711 - 369130 | 14623.8 |
| hypothetical protein | PMI12_00378 | Not Available | - | 369641 - 370009 | 12900.7 |
| putative copper-binding protein | PMI12_00379 | Not Available | - | 370084 - 370575 | 17373.8 |
| putative multicopper oxidase | PMI12_00380 | Not Available | - | 370623 - 372038 | 52041.7 |
| outer membrane protein | PMI12_00381 | Not Available | - | 372070 - 373494 | 51285.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.