Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | PMI12_00312 | Not Available | + | 312140 - 313420 | 46014.4 |
| histidyl-trna synthetase | PMI12_00313 | Not Available | + | 313436 - 314746 | 48019.4 |
| hypothetical protein | PMI12_00314 | Not Available | + | 314753 - 315445 | 25315.0 |
| beta-barrel assembly machine subunit bamb | PMI12_00315 | Not Available | + | 315452 - 316594 | 39589.3 |
| ribosome-associated gtpase enga | PMI12_00316 | Not Available | + | 316661 - 318004 | 49447.3 |
| rna chaperone hfq | PMI12_00317 | Not Available | + | 318168 - 318413 | 9060.9 |
| gtp-binding protein hflx | PMI12_00318 | Not Available | + | 318470 - 319639 | 43048.4 |
| hflk protein | PMI12_00319 | Not Available | + | 319714 - 321072 | 48718.3 |
| hflc protein | PMI12_00320 | Not Available | + | 321090 - 321989 | 33869.4 |
| atp phosphoribosyltransferase, regulatory subunit | PMI12_00321 | Not Available | + | 322245 - 323405 | 41363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
