Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin-like protein | PMI12_00281 | Not Available | - | 273584 - 274225 | 22331.4 |
| zn-dependent oligopeptidase | PMI12_00282 | Not Available | - | 274256 - 276313 | 76441.2 |
| 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase | PMI12_00283 | Not Available | - | 276319 - 277170 | 29618.2 |
| response regulator | PMI12_00284 | Not Available | - | 277251 - 277886 | 23402.4 |
| pas domain s-box | PMI12_00285 | Not Available | - | 277883 - 280309 | 89897.0 |
| pyruvate dehydrogenase e1 component, homodimeric type | PMI12_00286 | Not Available | + | 280640 - 283354 | 101112.0 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form | PMI12_00287 | Not Available | + | 283406 - 285070 | 56744.4 |
| atp-dependent protease hslvu (clpyq), peptidase subunit | PMI12_00288 | Not Available | + | 285141 - 285734 | 21744.9 |
| dihydrolipoamide dehydrogenase | PMI12_00289 | Not Available | + | 285731 - 287545 | 62813.0 |
| cell wall-associated hydrolase, invasion-associated protein | PMI12_00290 | Not Available | - | 287620 - 288102 | 17560.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.