Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00241 | Not Available | + | 232349 - 232621 | 10287.3 |
| hypothetical protein | PMI12_00242 | Not Available | + | 233323 - 233634 | 11201.6 |
| hypothetical protein | PMI12_00243 | Not Available | + | 234180 - 234788 | 21930.4 |
| hypothetical protein | PMI12_00244 | Not Available | - | 234982 - 235224 | 9310.38 |
| hypothetical protein | PMI12_00245 | Not Available | - | 235348 - 235713 | 13812.2 |
| vcbs repeat-containing protein | PMI12_00246 | Not Available | + | 236013 - 239528 | 113441.0 |
| type i secretion system abc transporter, prtd family | PMI12_00247 | Not Available | + | 239581 - 241293 | 61177.6 |
| type i secretion membrane fusion protein, hlyd family | PMI12_00248 | Not Available | + | 241355 - 242692 | 49252.0 |
| trna dihydrouridine synthase a | PMI12_00249 | Not Available | + | 242822 - 243811 | 37454.9 |
| transcriptional regulator | PMI12_00250 | Not Available | + | 243974 - 244759 | 27830.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.