Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | PMI12_00211 | Not Available | - | 203173 - 204594 | 51063.2 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_00212 | Not Available | - | 204639 - 205304 | 24805.9 |
| hypothetical protein | PMI12_00213 | Not Available | - | 205330 - 206340 | 35424.8 |
| transcriptional regulator | PMI12_00214 | Not Available | - | 206413 - 207207 | 29191.2 |
| shikimate 5-dehydrogenase | PMI12_00215 | Not Available | + | 207407 - 208330 | 32859.6 |
| shikimate 5-dehydrogenase | PMI12_00216 | Not Available | + | 208360 - 209193 | 29506.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | PMI12_00217 | Not Available | + | 209210 - 210421 | 42526.3 |
| hypothetical protein, gamma-carboxymuconolactone decarboxylase subunit like protein | PMI12_00218 | Not Available | + | 210418 - 210840 | 15516.8 |
| arabinose efflux permease family protein | PMI12_00219 | Not Available | + | 210837 - 212060 | 42949.2 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_00220 | Not Available | + | 212057 - 212821 | 26900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.